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publications [2019/07/16 02:29] ramirez [2019] |
publications [2020/01/10 10:00] ramirez [2020] |
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====== Publications ====== | ====== Publications ====== | ||
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+ | ===== 2020 ===== | ||
+ | Hänscheid T, Grobusch MP. 2020. <fc #0000FF>Coenzyme Q10 and cerebral malaria in mice: Questionable interpretations, improbable usefulness in humans</fc>. Parasitol Int 74:101969. [[http://www.ncbi.nlm.nih.gov/pubmed/31421269|(PMID: 31421269)]] | ||
===== 2019 ===== | ===== 2019 ===== | ||
+ | [[people:afriaes|Friães A]], [[people:jmelocristino|Melo-Cristino J]], [[people:ramirez|Ramirez M]], Portuguese Group for the Study of Streptococcal Infections. 2019. <fc #0000FF>Changes in //emm// types and superantigen gene content of //Streptococcus pyogenes// causing invasive infections in Portugal</fc>. Sci Rep 9:18051. [[http://www.ncbi.nlm.nih.gov/pubmed/31792274|(PMID: 31792274)]] | ||
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+ | Hänscheid T, Schlagenhauf P, Grobusch MP. 2019. Atovaquone/proguanil for malaria chemoprophylaxis - Could a difference in susceptibility during hepatic development explain the need to continue drug intake for 7 days post-exposure? Travel Med Infect Dis 101527. [[http://www.ncbi.nlm.nih.gov/pubmed/31759143|(PMID: 31759143)]] | ||
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+ | van der Linden M, Mamede R, Levina N, Helwig P, Vila-Cerqueira P, Carriço JA, [[people:jmelocristino|Melo-Cristino J]], [[people:ramirez|Ramirez M]], [[people:emartins|Martins ER]]. 2019. <fc #0000FF>Heterogeneity of penicillin-non-susceptible group B streptococci isolated from a single patient in Germany</fc>. J Antimicrob Chemother. //In press//. [[http://www.ncbi.nlm.nih.gov/pubmed/31740946|(PMID: 31740946)]] | ||
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+ | Duque-Valencia J, Forero-Muñoz NR, Díaz FJ, [[people:emartins|Martins E]], Barato P, Ruiz-Saenz J. 2019. <fc #0000FF>Phylogenetic evidence of the intercontinental circulation of a canine distemper virus lineage in the Americas</fc>. Sci Rep 9:15747. [[http://www.ncbi.nlm.nih.gov/pubmed/31673120|(PMID: 31673120)]] | ||
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+ | Fleres G, Couto N, Schuele L, Chlebowicz M A, [[people:cmendes|Mendes C I]], van der Sluis L W M, Rossen J W A, Friedrich A W, García-Cobos S. 2019. <fc #0000FF>Detection of a novel //mcr-5.4// gene variant in hospital tap water by shotgun metagenomic sequencing</fc>. J Antimicrob Chemother 74: 3626–3628 [[https://www.ncbi.nlm.nih.gov/pubmed/31504580|(PMID: 31504580)]] | ||
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+ | Espadinha D, Sobral R G, [[people:cmendes|Mendes C I]], Méric G, Sheppard S K, [[people:jcarrico|Carriço JA]], de Lencastre H, Miragaia M. 2019. <fc #0000FF>Distinct Phenotypic and Genomic Signatures Underlie Contrasting Pathogenic Potential of // Staphylococcus epidermidis// Clonal Lineages</fc>. Front Microbiol 10: 1971. [[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6719527/|(PMID: 31507574)]] | ||
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Dias O, Saraiva J, Faria C, [[people:ramirez|Ramirez M]], Pinto F, Rocha I. 2019. <fc #0000FF>iDS372, a phenotypically reconciled model for the metabolism of //Streptococcus pneumoniae// strain R6</fc>. Front Microbiol 10:1283. [[http://www.ncbi.nlm.nih.gov/pubmed/31293525|(PMID: 31293525)]] | Dias O, Saraiva J, Faria C, [[people:ramirez|Ramirez M]], Pinto F, Rocha I. 2019. <fc #0000FF>iDS372, a phenotypically reconciled model for the metabolism of //Streptococcus pneumoniae// strain R6</fc>. Front Microbiol 10:1283. [[http://www.ncbi.nlm.nih.gov/pubmed/31293525|(PMID: 31293525)]] | ||
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Motro Y, [[people:jcarrico|Carriço JA]], Friedrich AW, Rossen JW, Moran-Gilad J. 2018.<fc #0000FF> ESCMID Postgraduate Education Course Regional Capacity Building for Integration of Next-Generation Sequencing in the Clinical Microlab.</fc> Microbes Infect 20:275–280. [[http://www.ncbi.nlm.nih.gov/pubmed/29555344 |(PMID: 29555344)]] | Motro Y, [[people:jcarrico|Carriço JA]], Friedrich AW, Rossen JW, Moran-Gilad J. 2018.<fc #0000FF> ESCMID Postgraduate Education Course Regional Capacity Building for Integration of Next-Generation Sequencing in the Clinical Microlab.</fc> Microbes Infect 20:275–280. [[http://www.ncbi.nlm.nih.gov/pubmed/29555344 |(PMID: 29555344)]] | ||
- | Silva M, [[people:mpmachado|Machado MP]], Silva DN, Rossi M, Moran-Gilad J, Santos S, [[people:ramirez|Ramirez M]], [[people:jcarrico|Carriço JA]]. <fc #0000FF> chewBBACA: A complete suite for gene-by-gene schema creation and strain identification.</fc> Microb Genom. 2018 Mar 15. doi: 10.1099/mgen.0.000166. [Epub ahead of print] [[http://www.ncbi.nlm.nih.gov/pubmed/29543149 |(PMID: 29543149)]] | + | Silva M, [[people:mpmachado|Machado MP]], Silva DN, Rossi M, Moran-Gilad J, Santos S, [[people:ramirez|Ramirez M]], [[people:jcarrico|Carriço JA]]. 2018. <fc #0000FF> chewBBACA: A complete suite for gene-by-gene schema creation and strain identification.</fc> Microb Genom. 4. doi: 10.1099/mgen.0.000166. [[http://www.ncbi.nlm.nih.gov/pubmed/29543149 |(PMID: 29543149)]] |
[[people:jcarrico|Carriço JA]], Crochemore M, Francisco AP, Pissis SP, [[people:bgoncalves|Ribeiro-Gonçalves B]], Vaz C.<fc #0000FF> Fast phylogenetic inference from typing data.</fc> Algorithms Mol Biol. 2018 Feb 15;13:4. doi: 10.1186/s13015-017-0119-7. eCollection 2018. [[http://www.ncbi.nlm.nih.gov/pubmed/29467814 |(PMID: 29467814)]] | [[people:jcarrico|Carriço JA]], Crochemore M, Francisco AP, Pissis SP, [[people:bgoncalves|Ribeiro-Gonçalves B]], Vaz C.<fc #0000FF> Fast phylogenetic inference from typing data.</fc> Algorithms Mol Biol. 2018 Feb 15;13:4. doi: 10.1186/s13015-017-0119-7. eCollection 2018. [[http://www.ncbi.nlm.nih.gov/pubmed/29467814 |(PMID: 29467814)]] | ||
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Pinto, F. R., J. Melo-Cristino, and [[people:ramirez|M. Ramirez]]. 2008. <fc #0000FF>A confidence interval for the Wallace coefficient of concordance and its application to microbial typing methods</fc>. PLoS ONE 3:e3696. [[http://www.ncbi.nlm.nih.gov/pubmed/19002246|(PMID: 19002246)]] | Pinto, F. R., J. Melo-Cristino, and [[people:ramirez|M. Ramirez]]. 2008. <fc #0000FF>A confidence interval for the Wallace coefficient of concordance and its application to microbial typing methods</fc>. PLoS ONE 3:e3696. [[http://www.ncbi.nlm.nih.gov/pubmed/19002246|(PMID: 19002246)]] | ||
- | Aguiar, S. I., I. Serrano, F. R. Pinto, J. Melo-Cristino, [[people:ramirez|M. Ramirez]], and the Portuguese Surveillance Group for the Study of Respiratory Pathogens. 2008. <fc #0000FF>Changes in pneumococcal invasive disease with non-universal vaccination coverage of the seven-valent conjugate vaccine</fc>. Clin. Microbiol. Infect. 14:835-843. [[http://www.ncbi.nlm.nih.gov/pubmed/18844684|(PMID: 18844684)]] | + | Aguiar, S. I., I. Serrano, F. R. Pinto, J. Melo-Cristino, [[people:ramirez|M. Ramirez]], and the Portuguese Surveillance Group for the Study of Respiratory Pathogens. 2008. <fc #0000FF>Changes in //Streptococcus pneumoniae// serotypes causing invasive disease with non-universal vaccination coverage of the seven-valent conjugate vaccine</fc>. Clin. Microbiol. Infect. 14:835-843. [[http://www.ncbi.nlm.nih.gov/pubmed/18844684|(PMID: 18844684)]] |
Silva-Costa, C., F. R. Pinto, [[people:ramirez|M. Ramirez]], J. Melo-Cristino, and the Portuguese Surveillance Group for the Study of Respiratory Pathogens. 2008. <fc #0000FF>Decrease in macrolide resistance and clonal instability among //Streptococcus pyogenes// in Portugal</fc>. Clin. Microbiol. Infect. 14:1152-1159. [[http://www.ncbi.nlm.nih.gov/pubmed/19046174|(PMID: 19046174)]] | Silva-Costa, C., F. R. Pinto, [[people:ramirez|M. Ramirez]], J. Melo-Cristino, and the Portuguese Surveillance Group for the Study of Respiratory Pathogens. 2008. <fc #0000FF>Decrease in macrolide resistance and clonal instability among //Streptococcus pyogenes// in Portugal</fc>. Clin. Microbiol. Infect. 14:1152-1159. [[http://www.ncbi.nlm.nih.gov/pubmed/19046174|(PMID: 19046174)]] |