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publications [2019/01/09 10:01] ramirez [2018] |
publications [2019/01/09 10:04] ramirez [2019] |
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| ===== 2019 ===== | ===== 2019 ===== | ||
| Echániz-Aviles G, Guerreiro SI, [[people:anacosta|Silva-Costa C]], [[people:cmendes|Mendes CI]], [[people:jcarrico|Carriço JA]], Carnalla-Barajas MN, Soto-Noguerón A, Velazquez-Meza ME, [[people:jmelocristino|Melo-Cristino J]], Luévanos-Velazquez A, Martínez-Medina L, Vázquez-Larios MDR, [[people:ramirez|Ramirez M]]. 2018. <fc #0000FF>//Streptococcus pneumoniae// serotype 3 in Mexico (1994-2017): decrease of the unusual CC4909 lineage post-PCV13 introduction</fc>. J Clin Microbiol. 57 e01354-18 [[https://doi.org/10.1128/JCM.01354-18|doi:10.1128/JCM.01354-18]] [[http://www.ncbi.nlm.nih.gov/pubmed/30404945|(PMID: 30404945)]] | Echániz-Aviles G, Guerreiro SI, [[people:anacosta|Silva-Costa C]], [[people:cmendes|Mendes CI]], [[people:jcarrico|Carriço JA]], Carnalla-Barajas MN, Soto-Noguerón A, Velazquez-Meza ME, [[people:jmelocristino|Melo-Cristino J]], Luévanos-Velazquez A, Martínez-Medina L, Vázquez-Larios MDR, [[people:ramirez|Ramirez M]]. 2018. <fc #0000FF>//Streptococcus pneumoniae// serotype 3 in Mexico (1994-2017): decrease of the unusual CC4909 lineage post-PCV13 introduction</fc>. J Clin Microbiol. 57 e01354-18 [[https://doi.org/10.1128/JCM.01354-18|doi:10.1128/JCM.01354-18]] [[http://www.ncbi.nlm.nih.gov/pubmed/30404945|(PMID: 30404945)]] | ||
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| + | Pinto M, González-Díaz A, [[people:mpmachado|Machado MP]], Duarte S, Vieira L, [[people:jcarrico|Carriço JA]], Marti S, Bajanca-Lavado MP, Gomes JP. 2018. <fc #0000FF>Insights into the population structure and pan-genome of //Haemophilus influenzae//</fc>. Infect Genet Evol. 67:126–135 [[http://www.ncbi.nlm.nih.gov/pubmed/30391557|(PMID: 30391557)]] | ||
| ===== 2018 ===== | ===== 2018 ===== | ||
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| Jesus TF, [[people:bgoncalves|Ribeiro-Gonçalves B]], Silva DN, Bortolaia V, [[people:ramirez|Ramirez M]], [[people:jcarrico|Carriço JA]]. 2018. <fc #0000FF>Plasmid ATLAS: plasmid visual analytics and identification in high-throughput sequencing data</fc>. Nucleic Acids Res. //In press// [[https://doi.org/10.1093/nar/gky1073|doi:10.1093/nar/gky1073]] [[http://www.ncbi.nlm.nih.gov/pubmed/30395323|(PMID: 30395323)]] | Jesus TF, [[people:bgoncalves|Ribeiro-Gonçalves B]], Silva DN, Bortolaia V, [[people:ramirez|Ramirez M]], [[people:jcarrico|Carriço JA]]. 2018. <fc #0000FF>Plasmid ATLAS: plasmid visual analytics and identification in high-throughput sequencing data</fc>. Nucleic Acids Res. //In press// [[https://doi.org/10.1093/nar/gky1073|doi:10.1093/nar/gky1073]] [[http://www.ncbi.nlm.nih.gov/pubmed/30395323|(PMID: 30395323)]] | ||
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| - | Pinto M, González-Díaz A, [[people:mpmachado|Machado MP]], Duarte S, Vieira L, [[people:jcarrico|Carriço JA]], Marti S, Bajanca-Lavado MP, Gomes JP. 2018. <fc #0000FF>Insights into the population structure and pan-genome of //Haemophilus influenzae//</fc>. Infect Genet Evol. //In press// [[https://doi.org/10.1016/j.meegid.2018.10.025|doi:10.1016/j.meegid.2018.10.025]] [[http://www.ncbi.nlm.nih.gov/pubmed/30391557|(PMID: 30391557)]] | ||
| [[people:ahoracio|Horácio AN]], [[people:anacosta|Silva-Costa C]], Lopes E, [[people:ramirez|Ramirez M]], [[people:jmelocristino|Melo-Cristino J]], Portuguese Group for the Study of Streptococcal Infections. 2018. <fc #0000FF>Conjugate vaccine serotypes persist as major causes of non-invasive pneumococcal pneumonia in Portugal despite declines in serotypes 3 and 19A (2012-2015)</fc>. PLoS ONE 13:e0206912.[[https://doi.org/10.1371/journal.pone.0206912|doi:10.1371/journal.pone.0206912]] [[http://www.ncbi.nlm.nih.gov/pubmed/30388168|(PMID: 30388168)]] | [[people:ahoracio|Horácio AN]], [[people:anacosta|Silva-Costa C]], Lopes E, [[people:ramirez|Ramirez M]], [[people:jmelocristino|Melo-Cristino J]], Portuguese Group for the Study of Streptococcal Infections. 2018. <fc #0000FF>Conjugate vaccine serotypes persist as major causes of non-invasive pneumococcal pneumonia in Portugal despite declines in serotypes 3 and 19A (2012-2015)</fc>. PLoS ONE 13:e0206912.[[https://doi.org/10.1371/journal.pone.0206912|doi:10.1371/journal.pone.0206912]] [[http://www.ncbi.nlm.nih.gov/pubmed/30388168|(PMID: 30388168)]] | ||